SRR1301054 (PRJNA219750)
Processing Status: Not Yet Started
General Details
| Sample Name | GSM1399612 |
|---|---|
| Organism | Escherichia coli |
| Release Date | 6/2014 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 6966050 |
|---|---|
| Total Bases | 696605000 |
| Total Bases | 696605000 |
Repository Details
| SRA | SRR1301054 |
|---|---|
| ENA | SRR1301054 |
| BioProject | PRJNA219750 |
Experiment Details
| Title | wt_noser_mono |
|---|
Sample Details
| Run Accession | SRR1301054 |
|---|---|
| Total Number Of Spots (Original File)) | 6966050 |
| Total Number Of Bases (Original File) | 696605000 |
| Average Read Length | 100 |
| Original File Size (Mb) | 350 |
| Experiment Id | SRX554708 |
| Library Strategy | ncRNA-Seq |
| Library Selection | size fractionation |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP030123 |
| Pubmed Id | 25416955 |
| Sample | SRS621974 |
| Biosample | SAMN02801787 |
| Sample Type | simple |
| Organism Taxid | 679895 |
| Organism | Escherichia coli |
| Sample Name | GSM1399612 |
| Center Name | GEO |
| Submission | SRA101966 |
| Month | 6 |
| Year | 2014 |
| Author | Subramaniam |
| Sample Source | whole cell lysate_ribosome profiling |
| Sample Title | wt_noser_mono |
| Library-Type | RNA-Seq |
| Condition | Wild Type |
| Strain | serA::kan |
| Stress | serine starvation |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1301054 | Escherichia coli | whole cell lysate_ribosome profiling | RNA-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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