SRR13150126 (PRJNA680923)
Processing Status: Completed
General Details
| Sample Name | GSM4946322 |
|---|---|
| Organism | Saccharomyces cerevisiae |
| Release Date | 11/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 13939401 |
|---|---|
| Total Bases | 1101212679 |
| Total Bases | 1101212679 |
Repository Details
| SRA | SRR13150126 |
|---|---|
| ENA | SRR13150126 |
| BioProject | PRJNA680923 |
Experiment Details
| Title | EV3 Ribo-Seq puf3D replicate 1 |
|---|
Sample Details
| Run Accession | SRR13150126 |
|---|---|
| Total Number Of Spots (Original File)) | 13939401 |
| Total Number Of Bases (Original File) | 1101212679 |
| Average Read Length | 79 |
| Original File Size (Mb) | 391 |
| Experiment Id | SRX9590372 |
| Library Name | 0.0 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP294317 |
| Pubmed Id | 33655635 |
| Sample | SRS7794872 |
| Biosample | SAMN16926532 |
| Sample Type | simple |
| Organism Taxid | 580240 |
| Organism | Saccharomyces cerevisiae |
| Sample Name | GSM4946322 |
| Center Name | GEO |
| Submission | SRA1164140 |
| Month | 11 |
| Year | 2020 |
| Author | Liu |
| Sample Source | W303-1A, puf3D, Ribosome protected mRNA |
| Sample Title | EV3 Ribo-Seq puf3D replicate 1 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Timepoint | NANA |
| Tissue | 0.0 |
| Cell-Line | 0.0 |
| Cellular-Compartment | 0.0 |
| Stage | mid-log phase |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | W303-1A |
| Age | 0.0 |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | puf3 |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR13150126 | Saccharomyces cerevisiae | W303-1A, puf3D, Ribosome protected mRNA | 0.0 | Ribo-Seq | Cycloheximide |  |
 |
 |
 |
|
|
||
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About