SRR13150129 (PRJNA680923)
Processing Status: Completed
General Details
| Sample Name | GSM4946325 |
|---|---|
| Organism | Saccharomyces cerevisiae |
| Release Date | 11/2020 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 12759409 |
|---|---|
| Total Bases | 1007993311 |
| Total Bases | 1007993311 |
Repository Details
| SRA | SRR13150129 |
|---|---|
| ENA | SRR13150129 |
| BioProject | PRJNA680923 |
Experiment Details
| Title | EV3 Ribo-Seq r0 puf3D replicate 2 |
|---|
Sample Details
| Run Accession | SRR13150129 |
|---|---|
| Total Number Of Spots (Original File)) | 12759409 |
| Total Number Of Bases (Original File) | 1007993311 |
| Average Read Length | 79 |
| Original File Size (Mb) | 343 |
| Experiment Id | SRX9590375 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP294317 |
| Pubmed Id | 33655635 |
| Sample | SRS7794873 |
| Biosample | SAMN16926570 |
| Sample Type | simple |
| Organism Taxid | 580240 |
| Organism | Saccharomyces cerevisiae |
| Sample Name | GSM4946325 |
| Center Name | GEO |
| Submission | SRA1164140 |
| Month | 11 |
| Year | 2020 |
| Author | Liu |
| Sample Source | W303-1A, r0 puf3D, Ribosome protected mRNA |
| Sample Title | EV3 Ribo-Seq r0 puf3D replicate 2 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Stage | mid-log phase |
| Strain | W303-1A |
| Genotype | puf3 rho0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR13150129 | Saccharomyces cerevisiae | W303-1A, r0 puf3D, Ribosome protected mRNA | Ribo-Seq | Cycloheximide |  |
 |
 |
 |
|
|
|||
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About