SRR13679779 (PRJNA701262)

Processing Status: Not Yet Started

General Details

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Sample Name GSM5074337
Organism Xenopus laevis
Release Date 7/2021

Sample Links

Run Details

Spots 13626072
Total Bases 545042880
Total Bases 545042880

Repository Details

SRA SRR13679779
ENA SRR13679779
BioProject PRJNA701262

Experiment Details

Title frog_oocyte_water_RiboZeroGold_RNA_seq

Sample Details

Run Accession SRR13679779
Total Number Of Spots (Original File)) 13626072
Total Number Of Bases (Original File) 545042880
Average Read Length 40
Original File Size (Mb) 196
Experiment Id SRX10069179
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP305686
Pubmed Id 34213414
Sample SRS8230907
Biosample SAMN17860319
Sample Type simple
Organism Taxid 8355
Organism Xenopus laevis
Sample Name GSM5074337
Center Name GEO
Submission SRA1194491
Month 7
Year 2021
Author Xiang
Sample Source Xenopus laevis stage VI oocyte
Sample Title frog_oocyte_water_RiboZeroGold_RNA_seq
Library-Type RNA-Seq
Sex female
Plasmid transfected with siRNAs targeting PABPC1 and PABPC4 for 72h
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR13679779 Xenopus laevis Xenopus laevis stage VI oocyte RNA-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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