SRR13679796 (PRJNA701262)

Processing Status: Not Yet Started

General Details

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Sample Name GSM5074352
Organism Homo sapiens
Release Date 7/2021

Sample Links

Run Details

Spots 14173406
Total Bases 708670300
Total Bases 708670300

Repository Details

SRA SRR13679796
ENA SRR13679796
BioProject PRJNA701262

Experiment Details

Title HCT116_OsTIR1_PABPC1_AID_plus_IAA_1h_RNA_seq

Sample Details

Run Accession SRR13679796
Total Number Of Spots (Original File)) 14173406
Total Number Of Bases (Original File) 708670300
Average Read Length 50
Original File Size (Mb) 268
Experiment Id SRX10069186
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP305686
Pubmed Id 34213414
Sample SRS8230914
Biosample SAMN17860478
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM5074352
Center Name GEO
Submission SRA1194491
Month 7
Year 2021
Author Xiang
Sample Source HCT116 cells, OsTIR1 knock-in, AID-tagged PABPC1
Sample Title HCT116_OsTIR1_PABPC1_AID_plus_IAA_1h_RNA_seq
Library-Type Ribo-Seq
Timepoint 1h
Tissue Oocyte
Cell-Line HCT116
Stage VI
Plasmid water-injected
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR13679796 Homo sapiens HCT116 cells, OsTIR1 knock-in, AID-tagged PABPC1 HCT116 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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