SRR13679797 (PRJNA701262)

Processing Status: Not Yet Started

General Details

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Sample Name GSM5074353
Organism Homo sapiens
Release Date 7/2021

Sample Links

Run Details

Spots 16310338
Total Bases 815516900
Total Bases 815516900

Repository Details

SRA SRR13679797
ENA SRR13679797
BioProject PRJNA701262

Experiment Details

Title HCT116_OsTIR1_PABPC1_AID_plus_IAA_3h_RNA_seq

Sample Details

Run Accession SRR13679797
Total Number Of Spots (Original File)) 16310338
Total Number Of Bases (Original File) 815516900
Average Read Length 50
Original File Size (Mb) 307
Experiment Id SRX10069187
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP305686
Pubmed Id 34213414
Sample SRS8230915
Biosample SAMN17860477
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM5074353
Center Name GEO
Submission SRA1194491
Month 7
Year 2021
Author Xiang
Sample Source HCT116 cells, OsTIR1 knock-in, AID-tagged PABPC1
Sample Title HCT116_OsTIR1_PABPC1_AID_plus_IAA_3h_RNA_seq
Library-Type Ribo-Seq
Timepoint 3h
Tissue Oocyte
Cell-Line HCT116
Stage VI
Plasmid eGFP-expressed
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR13679797 Homo sapiens HCT116 cells, OsTIR1 knock-in, AID-tagged PABPC1 HCT116 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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