SRR13679803 (PRJNA701262)
Processing Status: Failed
General Details
| Sample Name | GSM5074358 |
|---|---|
| Organism | Xenopus laevis |
| Release Date | 7/2021 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 86519583 |
|---|---|
| Total Bases | 3460783320 |
| Total Bases | 3460783320 |
Repository Details
| SRA | SRR13679803 |
|---|---|
| ENA | SRR13679803 |
| BioProject | PRJNA701262 |
Experiment Details
| Title | frog_oocyte_eGFP_no_rRNA_depeletion_ribo_seq |
|---|
Sample Details
| Run Accession | SRR13679803 |
|---|---|
| Total Number Of Spots (Original File)) | 86519583 |
| Total Number Of Bases (Original File) | 3460783320 |
| Average Read Length | 40 |
| Original File Size (Mb) | 1329 |
| Experiment Id | SRX10069192 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP305686 |
| Pubmed Id | 34213414 |
| Sample | SRS8230919 |
| Biosample | SAMN17860472 |
| Sample Type | simple |
| Organism Taxid | 8355 |
| Organism | Xenopus laevis |
| Sample Name | GSM5074358 |
| Center Name | GEO |
| Submission | SRA1194491 |
| Month | 7 |
| Year | 2021 |
| Author | Xiang |
| Sample Source | Xenopus laevis stage VI oocyte |
| Sample Title | frog_oocyte_eGFP_no_rRNA_depeletion_ribo_seq |
| Library-Type | Ribo-Seq |
| Sex | female |
| Plasmid | transfected with siRNAs targeting PABPC1 for 72h |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR13679803 | Xenopus laevis | Xenopus laevis stage VI oocyte | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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