SRR13679813 (PRJNA701262)

Processing Status: Completed

General Details

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Sample Name GSM5074367
Organism Homo sapiens
Release Date 7/2021

Sample Links

Run Details

Spots 14937499
Total Bases 746874950
Total Bases 746874950

Repository Details

SRA SRR13679813
ENA SRR13679813
BioProject PRJNA701262

Experiment Details

Title HCT116_OsTIR1_PABPC1_AID_plus_IAA_30m_ribo_seq

Sample Details

Run Accession SRR13679813
Total Number Of Spots (Original File)) 14937499
Total Number Of Bases (Original File) 746874950
Average Read Length 50
Original File Size (Mb) 326
Experiment Id SRX10069201
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP305686
Pubmed Id 34213414
Sample SRS8230929
Biosample SAMN17860374
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM5074367
Center Name GEO
Submission SRA1194491
Month 7
Year 2021
Author Xiang
Sample Source HCT116 cells, OsTIR1 knock-in, AID-tagged PABPC1
Sample Title HCT116_OsTIR1_PABPC1_AID_plus_IAA_30m_ribo_seq
Library-Type Ribo-Seq
Tissue Oocyte
Cell-Line HCT116
Stage VI
Plasmid eGFP-expressed
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR13679813 Homo sapiens HCT116 cells, OsTIR1 knock-in, AID-tagged PABPC1 HCT116 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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