SRR13679814 (PRJNA701262)

Processing Status: Completed

General Details

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Sample Name GSM5074368
Organism Homo sapiens
Release Date 7/2021

Sample Links

Run Details

Spots 15993724
Total Bases 799686200
Total Bases 799686200

Repository Details

SRA SRR13679814
ENA SRR13679814
BioProject PRJNA701262

Experiment Details

Title HCT116_OsTIR1_PABPC1_AID_plus_IAA_1h_ribo_seq

Sample Details

Run Accession SRR13679814
Total Number Of Spots (Original File)) 15993724
Total Number Of Bases (Original File) 799686200
Average Read Length 50
Original File Size (Mb) 309
Experiment Id SRX10069202
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP305686
Pubmed Id 34213414
Sample SRS8230930
Biosample SAMN17860373
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM5074368
Center Name GEO
Submission SRA1194491
Month 7
Year 2021
Author Xiang
Sample Source HCT116 cells, OsTIR1 knock-in, AID-tagged PABPC1
Sample Title HCT116_OsTIR1_PABPC1_AID_plus_IAA_1h_ribo_seq
Library-Type Ribo-Seq
Timepoint 1h
Tissue Oocyte
Cell-Line HCT116
Stage VI
Plasmid PABPC1-overexpressed
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR13679814 Homo sapiens HCT116 cells, OsTIR1 knock-in, AID-tagged PABPC1 HCT116 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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