SRR13679815 (PRJNA701262)

Processing Status: Completed

General Details

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Sample Name GSM5074369
Organism Homo sapiens
Release Date 7/2021

Sample Links

Run Details

Spots 13733303
Total Bases 686665150
Total Bases 686665150

Repository Details

SRA SRR13679815
ENA SRR13679815
BioProject PRJNA701262

Experiment Details

Title HCT116_OsTIR1_PABPC1_AID_plus_IAA_3h_ribo_seq

Sample Details

Run Accession SRR13679815
Total Number Of Spots (Original File)) 13733303
Total Number Of Bases (Original File) 686665150
Average Read Length 50
Original File Size (Mb) 266
Experiment Id SRX10069203
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP305686
Pubmed Id 34213414
Sample SRS8230932
Biosample SAMN17860372
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM5074369
Center Name GEO
Submission SRA1194491
Month 7
Year 2021
Author Xiang
Sample Source HCT116 cells, OsTIR1 knock-in, AID-tagged PABPC1
Sample Title HCT116_OsTIR1_PABPC1_AID_plus_IAA_3h_ribo_seq
Library-Type Ribo-Seq
Timepoint 3h
Tissue Oocyte
Cell-Line HCT116
Stage VI
Plasmid ePAB-overexpressed
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR13679815 Homo sapiens HCT116 cells, OsTIR1 knock-in, AID-tagged PABPC1 HCT116 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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