SRR13794643 (PRJNA705181)
Processing Status: Completed
General Details
| Sample Name | GSM5111959 |
|---|---|
| Organism | Mus musculus |
| Release Date | 2/2021 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 3431346 |
|---|---|
| Total Bases | 94448806 |
| Total Bases | 94448806 |
Repository Details
| SRA | SRR13794643 |
|---|---|
| ENA | SRR13794643 |
| BioProject | PRJNA705181 |
Experiment Details
| Title | STR_LRRK2_knockout_1_Ribo-seq |
|---|
Sample Details
| Run Accession | SRR13794643 |
|---|---|
| Total Number Of Spots (Original File)) | 3431346 |
| Total Number Of Bases (Original File) | 94448806 |
| Average Read Length | 27 |
| Original File Size (Mb) | 41 |
| Experiment Id | SRX10179668 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP308389 |
| Pubmed Id | 34759048 |
| Sample | SRS8328807 |
| Biosample | SAMN18075485 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM5111959 |
| Center Name | GEO |
| Submission | SRA1200634 |
| Month | 2 |
| Year | 2021 |
| Author | Kim |
| Sample Source | LRRK2 knockout |
| Sample Title | STR_LRRK2_knockout_1_Ribo-seq |
| Library-Type | Ribo-Seq |
| Condition | KO |
| Inhibitor | Frozen |
| Tissue | striatum |
| Strain | C57BL/6 |
| Age | 3 months old |
| Genotype | LRRK2 knockout |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR13794643 | Mus musculus | LRRK2 knockout | Ribo-Seq | Frozen |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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