SRR15164971 (PRJNA747022)
Processing Status: Completed
General Details
| Sample Name | GSM5456062 |
|---|---|
| Organism | Mus musculus |
| Release Date | 6/2022 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 97861414 |
|---|---|
| Total Bases | 6360991910 |
| Total Bases | 6360991910 |
Repository Details
| SRA | SRR15164971 |
|---|---|
| ENA | SRR15164971 |
| BioProject | PRJNA747022 |
Experiment Details
| Title | Riboseq_invivo_Lgr5_WT_m1 |
|---|
Sample Details
| Run Accession | SRR15164971 |
|---|---|
| Total Number Of Spots (Original File)) | 97861414 |
| Total Number Of Bases (Original File) | 6360991910 |
| Average Read Length | 65 |
| Original File Size (Mb) | 2614 |
| Experiment Id | SRX11472323 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP328552 |
| Pubmed Id | 35918345 |
| Sample | SRS9512818 |
| Biosample | SAMN20251282 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM5456062 |
| Center Name | GEO |
| Submission | SRA1259807 |
| Month | 6 |
| Year | 2022 |
| Author | Silva |
| Sample Source | small intestine |
| Sample Title | Riboseq_invivo_Lgr5_WT_m1 |
| Library-Type | Ribo-Seq |
| Condition | Wild Type |
| Inhibitor | untreated |
| Tissue | intestin |
| Strain | C57BL/6 |
| Genotype | Lgr5Cre.ERT2.RPL22.HA |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR15164971 | Mus musculus | small intestine | Ribo-Seq | untreated |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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