SRR15219636 (PRJNA744888)
Processing Status: Completed
General Details
| Sample Name | GSM5467943 |
|---|---|
| Organism | Mus musculus |
| Release Date | 5/2023 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 76342985 |
|---|---|
| Total Bases | 2748347460 |
| Total Bases | 2748347460 |
Repository Details
| SRA | SRR15219636 |
|---|---|
| ENA | SRR15219636 |
| BioProject | PRJNA744888 |
Experiment Details
| Title | Ribosome profiling in Nrde2 knockout mES cells_ replicate 2 |
|---|
Sample Details
| Run Accession | SRR15219636 |
|---|---|
| Total Number Of Spots (Original File)) | 76342985 |
| Total Number Of Bases (Original File) | 2748347460 |
| Average Read Length | 36 |
| Original File Size (Mb) | 1348 |
| Experiment Id | SRX11525587 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP327516 |
| Pubmed Id | 37137667 |
| Sample | SRS9562949 |
| Biosample | SAMN20353361 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM5467943 |
| Center Name | GEO |
| Submission | SRA1256467 |
| Month | 5 |
| Year | 2023 |
| Author | Flemr |
| Sample Source | embryonic stem (ES) cells |
| Sample Title | Ribosome profiling in Nrde2 knockout mES cells_ replicate 2 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Condition | KO |
| Cell-Line | embryonic stem (ES) cells |
| Genotype | Nrde2 knockouthybrid 129-C57BL/6 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR15219636 | Mus musculus | embryonic stem (ES) cells | embryonic stem (ES) cells | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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