SRR1535540 (PRJNA257365)

Processing Status: Completed

General Details

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Sample Name GSM1464103
Organism Homo sapiens
Release Date 7/2015

Sample Links

Run Details

Spots 34802880
Total Bases 1705341120
Total Bases 1705341120

Repository Details

SRA SRR1535540
ENA SRR1535540
BioProject PRJNA257365

Experiment Details

Title RP 2 h p.i. - Rep 2

Sample Details

Run Accession SRR1535540
Total Number Of Spots (Original File)) 34802880
Total Number Of Bases (Original File) 1705341120
Average Read Length 49
Original File Size (Mb) 1106
Experiment Id SRX668710
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP045214
Pubmed Id 25989971
Sample SRS673072
Biosample SAMN02950960
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM1464103
Center Name GEO
Submission SRA177782
Month 7
Year 2015
Author Rutkowski
Sample Source Ribosome profiling
Sample Title RP 2 h p.i. - Rep 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Inhibitor Cycloheximide
Timepoint 2h
Tissue Skin
Cell-Line Fibroblast
Infected mock
Barcode Information NNNTTGTNN
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1535540 Homo sapiens Ribosome profiling Fibroblast Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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