SRR1535548 (PRJNA257365)
Processing Status: Completed
General Details
| Sample Name | GSM1464105 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 7/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 21638307 |
|---|---|
| Total Bases | 1060277043 |
| Total Bases | 1060277043 |
Repository Details
| SRA | SRR1535548 |
|---|---|
| ENA | SRR1535548 |
| BioProject | PRJNA257365 |
Experiment Details
| Title | RP 6 h p.i. - Rep 2 |
|---|
Sample Details
| Run Accession | SRR1535548 |
|---|---|
| Total Number Of Spots (Original File)) | 21638307 |
| Total Number Of Bases (Original File) | 1060277043 |
| Average Read Length | 49 |
| Original File Size (Mb) | 746 |
| Experiment Id | SRX668712 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP045214 |
| Pubmed Id | 25989971 |
| Sample | SRS673075 |
| Biosample | SAMN02950962 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM1464105 |
| Center Name | GEO |
| Submission | SRA177782 |
| Month | 7 |
| Year | 2015 |
| Author | Rutkowski |
| Sample Source | Ribosome profiling |
| Sample Title | RP 6 h p.i. - Rep 2 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Inhibitor | Cycloheximide |
| Timepoint | 6h |
| Tissue | Skin |
| Cell-Line | Fibroblast |
| Infected | Herpes simplex virus 1, strain 17 |
| Barcode Information | NNNGGCGNN |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1535548 | Homo sapiens | Ribosome profiling | Fibroblast | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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