SRR1593031 (PRJNA258219)

Processing Status: Completed

General Details

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Sample Name GSM1479602
Organism Mus musculus
Release Date 7/2015

Sample Links

Run Details

Spots 148414487
Total Bases 5936579480
Total Bases 5936579480

Repository Details

SRA SRR1593031
ENA SRR1593031
BioProject PRJNA258219

Experiment Details

Title wild-type mouse liver RPF

Sample Details

Run Accession SRR1593031
Total Number Of Spots (Original File)) 148414487
Total Number Of Bases (Original File) 5936579480
Average Read Length 40
Original File Size (Mb) 3710
Experiment Id SRX680708
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2000
Sra Project Accession (Srp) SRP045501
Pubmed Id 25263593
Sample SRS684387
Biosample SAMN02990404
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1479602
Center Name GEO
Submission SRA179319
Month 7
Year 2015
Author Eichhorn
Sample Source primary liver tissue
Sample Title wild-type mouse liver RPF
Library-Type Ribo-Seq
Condition Wild Type
Timepoint 6 hNA
Tissue Liver
Cell-Line 3T3
Growth-Condition contact inhibited
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1593031 Mus musculus primary liver tissue 3T3 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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