SRR1598975 (PRJNA223608)
Processing Status: Completed
General Details
| Sample Name | GSM1248729 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 7/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit Trips-Viz | Visit GWIPS-viz |
Run Details
| Spots | 92575736 |
|---|---|
| Total Bases | 4628786800 |
| Total Bases | 4628786800 |
Repository Details
| SRA | SRR1598975 |
|---|---|
| ENA | SRR1598975 |
| BioProject | PRJNA223608 |
Experiment Details
| Title | miR-1-transfected ribosome profiling |
|---|
Sample Details
| Run Accession | SRR1598975 |
|---|---|
| Total Number Of Spots (Original File)) | 92575736 |
| Total Number Of Bases (Original File) | 4628786800 |
| Average Read Length | 50 |
| Original File Size (Mb) | 2729 |
| Experiment Id | SRX367000 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP031849 |
| Pubmed Id | 25070500 |
| Sample | SRS493126 |
| Biosample | SAMN02380975 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM1248729 |
| Center Name | GEO |
| Submission | SRA107958 |
| Month | 7 |
| Year | 2015 |
| Author | Guo |
| Sample Source | U2OS cells |
| Sample Title | miR-1-transfected ribosome profiling |
| Library-Type | Ribo-Seq |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Timepoint | 32 hoursNA |
| Tissue | Bone |
| Cell-Line | U2OS |
| Plasmid | miR-1 duplex |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1598975 | Homo sapiens | U2OS cells | U2OS | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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