SRR1605306 (PRJNA263261)

Processing Status: Not Yet Started

General Details

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Sample Name GSM1520227
Organism Mus musculus
Release Date 2/2015

Sample Links

Run Details

Spots 23534790
Total Bases 2400548580
Total Bases 2400548580

Repository Details

SRA SRR1605306
ENA SRR1605306
BioProject PRJNA263261

Experiment Details

Title HuR KO_LPS1 [Ribo-Seq]

Sample Details

Run Accession SRR1605306
Total Number Of Spots (Original File)) 23534790
Total Number Of Bases (Original File) 2400548580
Average Read Length 51
Original File Size (Mb) 1500
Experiment Id SRX726858
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout PAIRED
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 1000
Sra Project Accession (Srp) SRP048708
Pubmed Id 25706746
Sample SRS717520
Biosample SAMN03098062
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1520227
Center Name GEO
Submission SRA188955
Month 2
Year 2015
Author Diaz-Muñoz
Sample Source Splenic B cells
Sample Title HuR KO_LPS1 [Ribo-Seq]
Library-Type Ribo-Seq
Condition LPS (48 hours)
Strain HuRflox/flox x mb1cre
Genotype HuR KO
Kit Used scriptminer: index CGATGT
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1605306 Mus musculus Splenic B cells Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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