SRR1605307 (PRJNA263261)
General Details
| Sample Name | GSM1520228 |
|---|---|
| Organism | Mus musculus |
| Release Date | 2/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 34667242 |
|---|---|
| Total Bases | 3536058684 |
| Total Bases | 3536058684 |
Repository Details
| SRA | SRR1605307 |
|---|---|
| ENA | SRR1605307 |
| BioProject | PRJNA263261 |
Experiment Details
| Title | HuR KO_LPS2 [Ribo-Seq] |
|---|
Sample Details
| Run Accession | SRR1605307 |
|---|---|
| Total Number Of Spots (Original File)) | 34667242 |
| Total Number Of Bases (Original File) | 3536058684 |
| Average Read Length | 51 |
| Original File Size (Mb) | 2192 |
| Experiment Id | SRX726859 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | PAIRED |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 1000 |
| Sra Project Accession (Srp) | SRP048708 |
| Pubmed Id | 25706746 |
| Sample | SRS717521 |
| Biosample | SAMN03098063 |
| Sample Type | simple |
| Organism Taxid | 10090 |
| Organism | Mus musculus |
| Sample Name | GSM1520228 |
| Center Name | GEO |
| Submission | SRA188955 |
| Month | 2 |
| Year | 2015 |
| Author | Diaz-Muñoz |
| Sample Source | Splenic B cells |
| Sample Title | HuR KO_LPS2 [Ribo-Seq] |
| Library-Type | Ribo-Seq |
| Condition | LPS (48 hours) |
| Strain | HuRflox/flox x mb1cre |
| Genotype | HuR KO |
| Kit Used | scriptminer: index ACTTGA |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1605307 | Mus musculus | Splenic B cells | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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