SRR1605308 (PRJNA263261)

Processing Status: Not Yet Started

General Details

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Sample Name GSM1520229
Organism Mus musculus
Release Date 2/2015

Sample Links

Run Details

Spots 27414038
Total Bases 2796231876
Total Bases 2796231876

Repository Details

SRA SRR1605308
ENA SRR1605308
BioProject PRJNA263261

Experiment Details

Title HuR KO_LPS3 [Ribo-Seq]

Sample Details

Run Accession SRR1605308
Total Number Of Spots (Original File)) 27414038
Total Number Of Bases (Original File) 2796231876
Average Read Length 51
Original File Size (Mb) 1745
Experiment Id SRX726860
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout PAIRED
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 1000
Sra Project Accession (Srp) SRP048708
Pubmed Id 25706746
Sample SRS717522
Biosample SAMN03098064
Sample Type simple
Organism Taxid 10090
Organism Mus musculus
Sample Name GSM1520229
Center Name GEO
Submission SRA188955
Month 2
Year 2015
Author Diaz-Muñoz
Sample Source Splenic B cells
Sample Title HuR KO_LPS3 [Ribo-Seq]
Library-Type Ribo-Seq
Condition LPS (48 hours)
Strain HuRflox/flox x mb1cre
Genotype HuR KO
Kit Used scriptminer: index CTTGTA
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1605308 Mus musculus Splenic B cells Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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