SRR1642038 (PRJNA266341)
Processing Status: Completed
General Details
| Sample Name | GM12890_Rep2 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 11/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 98011215 |
|---|---|
| Total Bases | 3528403740 |
| Total Bases | 3528403740 |
Repository Details
| SRA | SRR1642038 |
|---|---|
| ENA | SRR1642038 |
| BioProject | PRJNA266341 |
Experiment Details
| Title | 0.0 |
|---|
Sample Details
| Run Accession | SRR1642038 |
|---|---|
| Total Number Of Spots (Original File)) | 98011215 |
| Total Number Of Bases (Original File) | 3528403740 |
| Average Read Length | 36 |
| Original File Size (Mb) | 1958 |
| Experiment Id | SRX752501 |
| Library Name | GM12890_Rep2 |
| Library Strategy | OTHER |
| Library Selection | unspecified |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP049527 |
| Pubmed Id | <NA> |
| Sample | SRS737998 |
| Biosample | SAMN03161732 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GM12890_Rep2 |
| Center Name | Stanford University |
| Submission | SRA198298 |
| Month | 11 |
| Year | 2015 |
| Author | 0.0 |
| Sample Source | 0.0 |
| Sample Title | 0.0 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Condition | Test |
| Inhibitor | 0.0 |
| Timepoint | NANA |
| Tissue | EBV-transformed lymphoblastoid cells |
| Cell-Line | lymphoblastoid |
| Cellular-Compartment | 0.0 |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | 0.0 |
| Age | not applicable |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | 0.0 |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1642038 | Homo sapiens | 0.0 | lymphoblastoid | Ribo-Seq | 0.0 |  |
 |
 |
 |
|
|
||
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About