SRR1646672 (PRJNA266705)
Processing Status: Failed
General Details
| Sample Name | GSM1541727 |
|---|---|
| Organism | Saccharomyces cerevisiae |
| Release Date | 6/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 944511 |
|---|---|
| Total Bases | 53837127 |
| Total Bases | 53837127 |
Repository Details
| SRA | SRR1646672 |
|---|---|
| ENA | SRR1646672 |
| BioProject | PRJNA266705 |
Experiment Details
| Title | by_H2chxt5_2_p |
|---|
Sample Details
| Run Accession | SRR1646672 |
|---|---|
| Total Number Of Spots (Original File)) | 944511 |
| Total Number Of Bases (Original File) | 53837127 |
| Average Read Length | 57 |
| Original File Size (Mb) | 23 |
| Experiment Id | SRX756050 |
| Library Name | 0.0 |
| Library Strategy | RNA-Seq |
| Library Selection | CAGE |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina MiSeq |
| Sra Project Accession (Srp) | SRP049641 |
| Pubmed Id | 26046441 |
| Sample | SRS741267 |
| Biosample | SAMN03173330 |
| Sample Type | simple |
| Organism Taxid | 4932 |
| Organism | Saccharomyces cerevisiae |
| Sample Name | GSM1541727 |
| Center Name | GEO |
| Submission | SRA200635 |
| Month | 6 |
| Year | 2015 |
| Author | Pelechano |
| Sample Source | 5 min H2O2 stress + CHX at 4ºC; single-end read |
| Sample Title | by_H2chxt5_2_p |
| Library-Type | Ribo-Seq |
| Replicate-Number | 0.0 |
| Condition | High |
| Inhibitor | Cycloheximide |
| Timepoint | NANA |
| Tissue | 0.0 |
| Cell-Line | 0.0 |
| Cellular-Compartment | 0.0 |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | BY4741 |
| Age | 0.0 |
| Infected | S. Pombe + IVTs |
| Disease | 0.0 |
| Genotype | Mat a; his3delta1leu2delta0 ura3delta0 met15delta0 |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | YPD |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1646672 | Saccharomyces cerevisiae | 5 min H2O2 stress + CHX at 4ºC; single-end read | 0.0 | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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