SRR1722641 (PRJNA270712)
Processing Status: Completed
General Details
| Sample Name | GSM1568346 |
|---|---|
| Organism | Saccharomyces cerevisiae |
| Release Date | 12/2014 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit Trips-Viz | Visit GWIPS-viz |
Run Details
| Spots | 61328980 |
|---|---|
| Total Bases | 3127777980 |
| Total Bases | 3127777980 |
Repository Details
| SRA | SRR1722641 |
|---|---|
| ENA | SRR1722641 |
| BioProject | PRJNA270712 |
Experiment Details
| Title | vps35 tif |
|---|
Sample Details
| Run Accession | SRR1722641 |
|---|---|
| Total Number Of Spots (Original File)) | 61328980 |
| Total Number Of Bases (Original File) | 3127777980 |
| Average Read Length | 51 |
| Original File Size (Mb) | 2070 |
| Experiment Id | SRX816243 |
| Library Strategy | ncRNA-Seq |
| Library Selection | size fractionation |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2500 |
| Sra Project Accession (Srp) | SRP051314 |
| Pubmed Id | 25533483 |
| Sample | SRS796516 |
| Biosample | SAMN03268418 |
| Sample Type | simple |
| Organism Taxid | 4932 |
| Organism | Saccharomyces cerevisiae |
| Sample Name | GSM1568346 |
| Center Name | GEO |
| Submission | SRA218324 |
| Month | 12 |
| Year | 2014 |
| Author | Dhungel |
| Sample Source | vps35 deletion overexpressing TIF4631 |
| Sample Title | vps35 tif |
| Library-Type | Ribo-Seq |
| Condition | Test |
| Inhibitor | Cycloheximide |
| Tissue | whole cell lysate |
| Strain | Y7092 |
| Genotype | vps35::natMX |
| Plasmid | pAG416GAL-TIF4631 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1722641 | Saccharomyces cerevisiae | vps35 deletion overexpressing TIF4631 | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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