SRR1722641 (PRJNA270712)

Processing Status: Completed

General Details

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Sample Name GSM1568346
Organism Saccharomyces cerevisiae
Release Date 12/2014

Sample Links

Run Details

Spots 61328980
Total Bases 3127777980
Total Bases 3127777980

Repository Details

SRA SRR1722641
ENA SRR1722641
BioProject PRJNA270712

Experiment Details

Title vps35 tif

Sample Details

Run Accession SRR1722641
Total Number Of Spots (Original File)) 61328980
Total Number Of Bases (Original File) 3127777980
Average Read Length 51
Original File Size (Mb) 2070
Experiment Id SRX816243
Library Strategy ncRNA-Seq
Library Selection size fractionation
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP051314
Pubmed Id 25533483
Sample SRS796516
Biosample SAMN03268418
Sample Type simple
Organism Taxid 4932
Organism Saccharomyces cerevisiae
Sample Name GSM1568346
Center Name GEO
Submission SRA218324
Month 12
Year 2014
Author Dhungel
Sample Source vps35 deletion overexpressing TIF4631
Sample Title vps35 tif
Library-Type Ribo-Seq
Condition Test
Inhibitor Cycloheximide
Tissue whole cell lysate
Strain Y7092
Genotype vps35::natMX
Plasmid pAG416GAL-TIF4631
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR1722641 Saccharomyces cerevisiae vps35 deletion overexpressing TIF4631 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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