SRR18063242 (PRJNA808115)

Processing Status: Completed

General Details

View quality reports

Sample Name GSM5906248
Organism Homo sapiens
Release Date 8/2022

Sample Links

Run Details

Spots 122153619
Total Bases 3884535003
Total Bases 3884535003

Repository Details

SRA SRR18063242
ENA SRR18063242
BioProject PRJNA808115

Experiment Details

Title Ribosome profiling, SW480 eIF5A2 KO, replicate 1

Sample Details

Run Accession SRR18063242
Total Number Of Spots (Original File)) 122153619
Total Number Of Bases (Original File) 3884535003
Average Read Length 31
Original File Size (Mb) 1662
Experiment Id SRX14214942
Library Name GSM5906248
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP360420
Pubmed Id 35358571
Sample SRS12036858
Biosample SAMN26029175
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM5906248
Center Name Cancer Immunology and Virology, DFCI
Submission SRA1376648
Month 8
Year 2022
Author Farache
Sample Source SW480 eIF5A2 KO
Sample Title Ribosome profiling, SW480 eIF5A2 KO, replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition KO
Cell-Line SW480colorectal carcinoma cells
Genotype eIF5A2 KO
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR18063242 Homo sapiens SW480 eIF5A2 KO SW480colorectal carcinoma cells Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About