SRR18063243 (PRJNA808115)

Processing Status: Completed

General Details

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Sample Name GSM5906247
Organism Homo sapiens
Release Date 8/2022

Sample Links

Run Details

Spots 124252638
Total Bases 4383436209
Total Bases 4383436209

Repository Details

SRA SRR18063243
ENA SRR18063243
BioProject PRJNA808115

Experiment Details

Title Ribosome profiling, SW480 WT, replicate 1

Sample Details

Run Accession SRR18063243
Total Number Of Spots (Original File)) 124252638
Total Number Of Bases (Original File) 4383436209
Average Read Length 35
Original File Size (Mb) 1872
Experiment Id SRX14214941
Library Name GSM5906247
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP360420
Pubmed Id 35358571
Sample SRS12036857
Biosample SAMN26029176
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM5906247
Center Name Cancer Immunology and Virology, DFCI
Submission SRA1376648
Month 8
Year 2022
Author Farache
Sample Source SW480 WT
Sample Title Ribosome profiling, SW480 WT, replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Wild Type
Cell-Line SW480colorectal carcinoma cells
Genotype WT
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR18063243 Homo sapiens SW480 WT SW480colorectal carcinoma cells Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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