SRR1976448 (PRJNA281177)
Processing Status: Completed
General Details
| Sample Name | GSM1657725 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 9/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit Trips-Viz | Visit GWIPS-viz |
Run Details
| Spots | 131095287 |
|---|---|
| Total Bases | 6685859637 |
| Total Bases | 6685859637 |
Repository Details
| SRA | SRR1976448 |
|---|---|
| ENA | SRR1976448 |
| BioProject | PRJNA281177 |
Experiment Details
| Title | Ribosome footprints from M cells, pretreated with cycloheximide_2 |
|---|
Sample Details
| Run Accession | SRR1976448 |
|---|---|
| Total Number Of Spots (Original File)) | 131095287 |
| Total Number Of Bases (Original File) | 6685859637 |
| Average Read Length | 51 |
| Original File Size (Mb) | 4253 |
| Experiment Id | SRX997416 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP057253 |
| Pubmed Id | 26305499 |
| Sample | SRS911637 |
| Biosample | SAMN03485792 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM1657725 |
| Center Name | GEO |
| Submission | SRA259601 |
| Month | 9 |
| Year | 2015 |
| Author | Tanenbaum |
| Sample Source | Human Retinal pigment epithelial cells immortalized with hTERT |
| Sample Title | Ribosome footprints from M cells, pretreated with cycloheximide_2 |
| Library-Type | Ribo-Seq |
| Inhibitor | Cycloheximide |
| Timepoint | M |
| Tissue | Retina |
| Cell-Line | RPE-1 cells immortalized with hTERT |
| Cellular-Compartment | Endoplasmic reticulum |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR1976448 | Homo sapiens | Human Retinal pigment epithelial cells immortalized with hTERT | RPE-1 cells immortalized with hTERT | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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