SRR2086031 (PRJNA263582)
Processing Status: Completed
General Details
| Sample Name | GSM1782880 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 9/2015 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit Trips-Viz | Visit GWIPS-viz |
Run Details
| Spots | 54718534 |
|---|---|
| Total Bases | 2735926700 |
| Total Bases | 2735926700 |
Repository Details
| SRA | SRR2086031 |
|---|---|
| ENA | SRR2086031 |
| BioProject | PRJNA263582 |
Experiment Details
| Title | ribo_ND3_shTCOF1 |
|---|
Sample Details
| Run Accession | SRR2086031 |
|---|---|
| Total Number Of Spots (Original File)) | 54718534 |
| Total Number Of Bases (Original File) | 2735926700 |
| Average Read Length | 50 |
| Original File Size (Mb) | 1674 |
| Experiment Id | SRX1080130 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP048825 |
| Pubmed Id | 26399832 |
| Sample | SRS977990 |
| Biosample | SAMN03838482 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM1782880 |
| Center Name | GEO |
| Submission | SRA189363 |
| Month | 9 |
| Year | 2015 |
| Author | Werner |
| Sample Source | hES cell, treated with sh targeting TCOF1, ND 3d |
| Sample Title | ribo_ND3_shTCOF1 |
| Library-Type | Ribo-Seq |
| Condition | Test |
| Tissue | Embryo |
| Cell-Line | H1 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR2086031 | Homo sapiens | hES cell, treated with sh targeting TCOF1, ND 3d | H1 | Ribo-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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