SRR22192990 (PRJNA898352)

Processing Status: Completed

General Details

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Sample Name GSM6710482
Organism Homo sapiens
Release Date 2/2023

Sample Links

Run Details

Spots 71054524
Total Bases 2715494068
Total Bases 2715494068

Repository Details

SRA SRR22192990
ENA SRR22192990
BioProject PRJNA898352

Experiment Details

Title MDA-sgCTRL_rep1 (Ribo-seq)

Sample Details

Run Accession SRR22192990
Total Number Of Spots (Original File)) 71054524
Total Number Of Bases (Original File) 2715494068
Average Read Length 38
Original File Size (Mb) 1142
Experiment Id SRX18171415
Library Name GSM6710482
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) SRP406317
Pubmed Id <NA>
Sample SRS15670637
Biosample SAMN31608424
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM6710482
Center Name Biochemistry and Biophysics, UCSF
Submission SRA1534786
Month 2
Year 2023
Sample Source breast cancer cell line
Sample Title MDA-sgCTRL_rep1 (Ribo-seq)
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition Wild Type
Tissue Breast
Cell-Line MDA
Genotype control
Cancer poorly metastatic
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR22192990 Homo sapiens breast cancer cell line MDA Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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