SRR23828859 (PRJNA944112)

Processing Status: Completed

General Details

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Sample Name GSM7093036
Organism Homo sapiens
Release Date 3/2024

Sample Links

Run Details

Spots 55928706
Total Bases 3635365890
Total Bases 3635365890

Repository Details

SRA SRR23828859
ENA SRR23828859
BioProject PRJNA944112

Experiment Details

Title RPE-1 cells, 10hr, translation, rep1

Sample Details

Run Accession SRR23828859
Total Number Of Spots (Original File)) 55928706
Total Number Of Bases (Original File) 3635365890
Average Read Length 65
Original File Size (Mb) 1406
Experiment Id SRX19650594
Library Name GSM7093036
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP426981
Pubmed Id <NA>
Sample SRS17019246
Biosample SAMN33736313
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM7093036
Center Name Department of Oncological Sciences, University of Utah
Submission SRA1604127
Month 3
Year 2024
Author Edgar
Sample Source human RPE-1
Sample Title RPE-1 cells, 10hr, translation, rep1
Library-Type 0.0
Replicate-Number 1.0
Condition Test
Inhibitor 0.0
Timepoint NANA
Tissue Retina
Cell-Line RPE1
Cellular-Compartment Ribosome protected RNA fragments
Stage 0.0
Gene 0.0
Sex 0.0
Strain 0.0
Age 0.0
Infected 0.0
Disease 0.0
Genotype WT
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR23828859 Homo sapiens human RPE-1 RPE1 0.0 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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