SRR24210497 (PRJNA957227)

Processing Status: Not Yet Started

General Details

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Sample Name GSM7184210
Organism Homo sapiens
Release Date 7/2024

Sample Links

Run Details

Spots 54774530
Total Bases 3615118980
Total Bases 3615118980

Repository Details

SRA SRR24210497
ENA SRR24210497
BioProject PRJNA957227

Experiment Details

Title sgDDX3 arm, day 14 time point, replicate 1, ribosome footprints

Sample Details

Run Accession SRR24210497
Total Number Of Spots (Original File)) 54774530
Total Number Of Bases (Original File) 3615118980
Average Read Length 66
Original File Size (Mb) 1149
Experiment Id SRX20007014
Library Name GSM7184210
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) SRP433325
Pubmed Id <NA>
Sample SRS17351532
Biosample SAMN34247381
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM7184210
Center Name Floor Lab, Cell and Tissue Biology, University of California, San Francisco
Submission SRA1623592
Month 7
Year 2024
Author Xu
Sample Source K562
Sample Title sgDDX3 arm, day 14 time point, replicate 1, ribosome footprints
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition 0.0
Inhibitor 0.0
Timepoint NANA
Tissue Bone
Cell-Line K562
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain 0.0
Age 0.0
Infected 0.0
Disease 0.0
Genotype sgDDX3
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR24210497 Homo sapiens K562 K562 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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