SRR24451160 (PRJNA967640)
Processing Status: Completed
General Details
| Sample Name | GSM7300134 |
|---|---|
| Organism | Saccharomyces cerevisiae |
| Release Date | 5/2023 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 105026756 |
|---|---|
| Total Bases | 2422939619 |
| Total Bases | 2422939619 |
Repository Details
| SRA | SRR24451160 |
|---|---|
| ENA | SRR24451160 |
| BioProject | PRJNA967640 |
Experiment Details
| Title | BY4742 eIF4E-AID strain, 8 hour DMSO, ribo profiling, biol rep 2 |
|---|
Sample Details
| Run Accession | SRR24451160 |
|---|---|
| Total Number Of Spots (Original File)) | 105026756 |
| Total Number Of Bases (Original File) | 2422939619 |
| Average Read Length | 23 |
| Original File Size (Mb) | 3305 |
| Experiment Id | SRX20238252 |
| Library Name | GSM7300134 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina NovaSeq 6000 |
| Sra Project Accession (Srp) | SRP436183 |
| Pubmed Id | 37214807 |
| Sample | SRS17572137 |
| Biosample | SAMN34601632 |
| Sample Type | simple |
| Organism Taxid | 4932 |
| Organism | Saccharomyces cerevisiae |
| Sample Name | GSM7300134 |
| Center Name | Ingolia, MCB, University of California - Berkeley |
| Submission | SRA1633814 |
| Month | 5 |
| Year | 2023 |
| Author | Diamond |
| Sample Source | BY4742 |
| Sample Title | BY4742 eIF4E-AID strain, 8 hour DMSO, ribo profiling, biol rep 2 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 2.0 |
| Condition | Test |
| Inhibitor | 0.0 |
| Timepoint | 8hNA |
| Tissue | 0.0 |
| Cell-Line | BY4742NA |
| Cellular-Compartment | DMSO |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | 0.0 |
| Age | 0.0 |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | eIF4E-AID |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | DMSO |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR24451160 | Saccharomyces cerevisiae | BY4742 | BY4742NA | Ribo-Seq | 0.0 |  |
 |
 |
 |
|
|
||
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
ⓘ For more Information on the columns shown here see: About