SRR25592717 (PRJNA1003962)

Processing Status: Not Yet Started

General Details

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Sample Name GSM7699299
Organism Saccharomyces cerevisiae
Release Date 2/2024

Sample Links

Run Details

Spots 70300653
Total Bases 5263956923
Total Bases 5263956923

Repository Details

SRA SRR25592717
ENA SRR25592717
BioProject PRJNA1003962

Experiment Details

Title RNAseq_70m_1

Sample Details

Run Accession SRR25592717
Total Number Of Spots (Original File)) 70300653
Total Number Of Bases (Original File) 5263956923
Average Read Length 74
Original File Size (Mb) 1826
Experiment Id SRX21321113
Library Name GSM7699299
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP454359
Pubmed Id 38452761
Sample SRS18568544
Biosample SAMN36920120
Sample Type simple
Organism Taxid 4932
Organism Saccharomyces cerevisiae
Sample Name GSM7699299
Center Name Stirling Churchman, Genetics, Harvard Medical School
Submission SRA1689925
Month 2
Year 2024
Author Litsios
Sample Source MATa DAD2-GFP::HIS3 CAN1pr::TDH3pr-E2Crimson::HPH::can1Δ::STE2pr-LEU2 HTA2-mCherry::CaURA3 CDC11-TagRFP::natMX lyp1Δ ura3Δ0 his3Δ1 leu2Δ0 met15Δ0
Sample Title RNAseq_70m_1
Library-Type RNA-Seq
Tissue Bone
Cell-Line U2OS
Genotype MATa DAD2-GFP::HIS3 CAN1pr::TDH3pr-E2Crimson::HPH::can1{delta}::STE2pr-LEU2 HTA2-mCherry::CaURA3 CDC11-TagRFP::natMX lyp1{delta} ura3{delta}0 his3{delta}1 leu2{delta}0 met15{delta}0
Growth-Condition YEPD
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR25592717 Saccharomyces cerevisiae MATa DAD2-GFP::HIS3 CAN1pr::TDH3pr-E2Crimson::HPH::can1Δ::STE2pr-LEU2 HTA2-mCherry::CaURA3 CDC11-TagRFP::natMX lyp1Δ ura3Δ0 his3Δ1 leu2Δ0 met15Δ0 U2OS RNA-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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