SRR25592720 (PRJNA1003962)
Processing Status: Not Yet Started
General Details
| Sample Name | GSM7699296 |
|---|---|
| Organism | Saccharomyces cerevisiae |
| Release Date | 2/2024 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 47714168 |
|---|---|
| Total Bases | 3568218530 |
| Total Bases | 3568218530 |
Repository Details
| SRA | SRR25592720 |
|---|---|
| ENA | SRR25592720 |
| BioProject | PRJNA1003962 |
Experiment Details
| Title | RNAseq_50m_2 |
|---|
Sample Details
| Run Accession | SRR25592720 |
|---|---|
| Total Number Of Spots (Original File)) | 47714168 |
| Total Number Of Bases (Original File) | 3568218530 |
| Average Read Length | 74 |
| Original File Size (Mb) | 1334 |
| Experiment Id | SRX21321110 |
| Library Name | GSM7699296 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | NextSeq 500 |
| Sra Project Accession (Srp) | SRP454359 |
| Pubmed Id | 38452761 |
| Sample | SRS18568540 |
| Biosample | SAMN36920123 |
| Sample Type | simple |
| Organism Taxid | 4932 |
| Organism | Saccharomyces cerevisiae |
| Sample Name | GSM7699296 |
| Center Name | Stirling Churchman, Genetics, Harvard Medical School |
| Submission | SRA1689925 |
| Month | 2 |
| Year | 2024 |
| Author | Litsios |
| Sample Source | MATa DAD2-GFP::HIS3 CAN1pr::TDH3pr-E2Crimson::HPH::can1Δ::STE2pr-LEU2 HTA2-mCherry::CaURA3 CDC11-TagRFP::natMX lyp1Δ ura3Δ0 his3Δ1 leu2Δ0 met15Δ0 |
| Sample Title | RNAseq_50m_2 |
| Library-Type | RNA-Seq |
| Tissue | Bone |
| Cell-Line | U2OS |
| Genotype | MATa DAD2-GFP::HIS3 CAN1pr::TDH3pr-E2Crimson::HPH::can1{delta}::STE2pr-LEU2 HTA2-mCherry::CaURA3 CDC11-TagRFP::natMX lyp1{delta} ura3{delta}0 his3{delta}1 leu2{delta}0 met15{delta}0 |
| Growth-Condition | YEPD |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR25592720 | Saccharomyces cerevisiae | MATa DAD2-GFP::HIS3 CAN1pr::TDH3pr-E2Crimson::HPH::can1Δ::STE2pr-LEU2 HTA2-mCherry::CaURA3 CDC11-TagRFP::natMX lyp1Δ ura3Δ0 his3Δ1 leu2Δ0 met15Δ0 | U2OS | RNA-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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