SRR25592736 (PRJNA1003962)

Processing Status: Not Yet Started

General Details

View quality reports

Sample Name GSM7699280
Organism Saccharomyces cerevisiae
Release Date 2/2024

Sample Links

Run Details

Spots 57814831
Total Bases 3464197364
Total Bases 3464197364

Repository Details

SRA SRR25592736
ENA SRR25592736
BioProject PRJNA1003962

Experiment Details

Title CytoRP_0m_2

Sample Details

Run Accession SRR25592736
Total Number Of Spots (Original File)) 57814831
Total Number Of Bases (Original File) 3464197364
Average Read Length 59
Original File Size (Mb) 1329
Experiment Id SRX21321094
Library Name GSM7699280
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP454359
Pubmed Id 38452761
Sample SRS18568525
Biosample SAMN36920139
Sample Type simple
Organism Taxid 4932
Organism Saccharomyces cerevisiae
Sample Name GSM7699280
Center Name Stirling Churchman, Genetics, Harvard Medical School
Submission SRA1689925
Month 2
Year 2024
Author Litsios
Sample Source MATa DAD2-GFP::HIS3 CAN1pr::TDH3pr-E2Crimson::HPH::can1Δ::STE2pr-LEU2 HTA2-mCherry::CaURA3 CDC11-TagRFP::natMX lyp1Δ ura3Δ0 his3Δ1 leu2Δ0 met15Δ0
Sample Title CytoRP_0m_2
Library-Type Ribo-Seq
Tissue Bone
Cell-Line U2OS
Cellular-Compartment Cytoplasmic
Genotype MATa DAD2-GFP::HIS3 CAN1pr::TDH3pr-E2Crimson::HPH::can1{delta}::STE2pr-LEU2 HTA2-mCherry::CaURA3 CDC11-TagRFP::natMX lyp1{delta} ura3{delta}0 his3{delta}1 leu2{delta}0 met15{delta}0
Growth-Condition YEPD
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR25592736 Saccharomyces cerevisiae MATa DAD2-GFP::HIS3 CAN1pr::TDH3pr-E2Crimson::HPH::can1Δ::STE2pr-LEU2 HTA2-mCherry::CaURA3 CDC11-TagRFP::natMX lyp1Δ ura3Δ0 his3Δ1 leu2Δ0 met15Δ0 U2OS Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About