SRR27177531 (PRJNA1051101)

Processing Status: Completed

General Details

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Sample Name GSM7966609
Organism Homo sapiens
Release Date 1/2024

Sample Links

Run Details

Spots 5748415
Total Bases 431131125
Total Bases 431131125

Repository Details

SRA SRR27177531
ENA SRR27177531
BioProject PRJNA1051101

Experiment Details

Title HEK293T ΔYB-1ΔYB-3 + YB-1, Ribo-Seq, rep1

Sample Details

Run Accession SRR27177531
Total Number Of Spots (Original File)) 5748415
Total Number Of Bases (Original File) 431131125
Average Read Length 75
Original File Size (Mb) 164
Experiment Id SRX22858156
Library Name GSM7966609
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 500
Sra Project Accession (Srp) SRP477353
Pubmed Id 38339016
Sample SRS19833691
Biosample SAMN38765423
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM7966609
Center Name Institute of Protein Research
Submission SRA1766969
Month 1
Year 2024
Author Eliseeva
Sample Source cell line
Sample Title HEK293T ΔYB-1ΔYB-3 + YB-1, Ribo-Seq, rep1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition High
Tissue Kidney
Cell-Line HEK293
Genotype YBX3 restored expression in YBX1 knockout & YBX3 knockout
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR27177531 Homo sapiens cell line HEK293 Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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