SRR27177560 (PRJNA1051101)
Processing Status: Completed
General Details
| Sample Name | GSM7966614 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 1/2024 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 362084 |
|---|---|
| Total Bases | 54312600 |
| Total Bases | 54312600 |
Repository Details
| SRA | SRR27177560 |
|---|---|
| ENA | SRR27177560 |
| BioProject | PRJNA1051101 |
Experiment Details
| Title | HEK293T ΔYB-1ΔYB-3 + YB-1 + YB-3, Ribo-Seq, rep2 |
|---|
Sample Details
| Run Accession | SRR27177560 |
|---|---|
| Total Number Of Spots (Original File)) | 362084 |
| Total Number Of Bases (Original File) | 54312600 |
| Average Read Length | 150 |
| Original File Size (Mb) | 21 |
| Experiment Id | SRX22858143 |
| Library Name | GSM7966614 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP477353 |
| Pubmed Id | 38339016 |
| Sample | SRS19833678 |
| Biosample | SAMN38765418 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM7966614 |
| Center Name | Institute of Protein Research |
| Submission | SRA1766969 |
| Month | 1 |
| Year | 2024 |
| Author | Eliseeva |
| Sample Source | cell line |
| Sample Title | HEK293T ΔYB-1ΔYB-3 + YB-1 + YB-3, Ribo-Seq, rep2 |
| Library-Type | RNA-Seq |
| Replicate-Number | 2.0 |
| Condition | High |
| Tissue | Kidney |
| Cell-Line | HEK293 |
| Genotype | YBX1 & YBX3 restored expression in YBX1 knockout & YBX3 knockout |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR27177560 | Homo sapiens | cell line | HEK293 | RNA-Seq |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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