SRR27731318 (PRJNA1069085)

Processing Status: Not Yet Started

General Details

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Sample Name GSM8036809
Organism Homo sapiens
Release Date 4/2024

Sample Links

Run Details

Spots 70196952
Total Bases 2421892763
Total Bases 2421892763

Repository Details

SRA SRR27731318
ENA SRR27731318
BioProject PRJNA1069085

Experiment Details

Title A549 cells infected with ZIKV sfRNAnull replicate 1 Ribo-seq

Sample Details

Run Accession SRR27731318
Total Number Of Spots (Original File)) 70196952
Total Number Of Bases (Original File) 2421892763
Average Read Length 34
Original File Size (Mb) 914
Experiment Id SRX23396912
Library Name GSM8036809
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 2000
Sra Project Accession (Srp) SRP486019
Pubmed Id 38917323
Sample SRS20257755
Biosample SAMN39614093
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM8036809
Center Name Laboratorio de virología, Fundación instituto leloir
Submission SRA1791954
Month 4
Year 2024
Author Pallarés
Sample Source A549 cells
Sample Title A549 cells infected with ZIKV sfRNAnull replicate 1 Ribo-seq
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition 0.0
Inhibitor 0.0
Timepoint NANA
Tissue Lung
Cell-Line A549
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain 0.0
Age 0.0
Infected 0.0
Disease 0.0
Genotype WT
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR27731318 Homo sapiens A549 cells A549 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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