SRR27731319 (PRJNA1069085)

Processing Status: Not Yet Started

General Details

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Sample Name GSM8036808
Organism Homo sapiens
Release Date 4/2024

Sample Links

Run Details

Spots 118192623
Total Bases 3860021995
Total Bases 3860021995

Repository Details

SRA SRR27731319
ENA SRR27731319
BioProject PRJNA1069085

Experiment Details

Title A549 cells infected with ZIKV WT replicate 2 Ribo-seq

Sample Details

Run Accession SRR27731319
Total Number Of Spots (Original File)) 118192623
Total Number Of Bases (Original File) 3860021995
Average Read Length 32
Original File Size (Mb) 1461
Experiment Id SRX23396911
Library Name GSM8036808
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model NextSeq 2000
Sra Project Accession (Srp) SRP486019
Pubmed Id 38917323
Sample SRS20257753
Biosample SAMN39614094
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM8036808
Center Name Laboratorio de virología, Fundación instituto leloir
Submission SRA1791954
Month 4
Year 2024
Author Pallarés
Sample Source A549 cells
Sample Title A549 cells infected with ZIKV WT replicate 2 Ribo-seq
Library-Type Ribo-Seq
Replicate-Number 0.0
Condition Wild Type
Inhibitor 0.0
Timepoint NANA
Tissue Lung
Cell-Line A549
Cellular-Compartment 0.0
Stage 0.0
Gene 0.0
Sex 0.0
Strain 0.0
Age 0.0
Infected 0.0
Disease 0.0
Genotype WT
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR27731319 Homo sapiens A549 cells A549 Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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