SRR27731319 (PRJNA1069085)
Processing Status: Not Yet Started
General Details
Sample Name | GSM8036808 |
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Organism | Homo sapiens |
Release Date | 4/2024 |
Sample Links
GWIPS-viz | Trips-Viz | Custom Track |
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Run Details
Spots | 118192623 |
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Total Bases | 3860021995 |
Total Bases | 3860021995 |
Repository Details
SRA | SRR27731319 |
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ENA | SRR27731319 |
BioProject | PRJNA1069085 |
Experiment Details
Title | A549 cells infected with ZIKV WT replicate 2 Ribo-seq |
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Sample Details
Run Accession | SRR27731319 |
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Total Number Of Spots (Original File)) | 118192623 |
Total Number Of Bases (Original File) | 3860021995 |
Average Read Length | 32 |
Original File Size (Mb) | 1461 |
Experiment Id | SRX23396911 |
Library Name | GSM8036808 |
Library Strategy | OTHER |
Library Selection | other |
Library Source | TRANSCRIPTOMIC |
Library Layout | SINGLE |
Insert Size | 0 |
Insert Deviation | 0 |
Platform | ILLUMINA |
Model | NextSeq 2000 |
Sra Project Accession (Srp) | SRP486019 |
Pubmed Id | 38917323 |
Sample | SRS20257753 |
Biosample | SAMN39614094 |
Sample Type | simple |
Organism Taxid | 9606 |
Organism | Homo sapiens |
Sample Name | GSM8036808 |
Center Name | Laboratorio de virología, Fundación instituto leloir |
Submission | SRA1791954 |
Month | 4 |
Year | 2024 |
Author | Pallarés |
Sample Source | A549 cells |
Sample Title | A549 cells infected with ZIKV WT replicate 2 Ribo-seq |
Library-Type | Ribo-Seq |
Replicate-Number | 0.0 |
Condition | Wild Type |
Inhibitor | 0.0 |
Timepoint | NANA |
Tissue | Lung |
Cell-Line | A549 |
Cellular-Compartment | 0.0 |
Stage | 0.0 |
Gene | 0.0 |
Sex | 0.0 |
Strain | 0.0 |
Age | 0.0 |
Infected | 0.0 |
Disease | 0.0 |
Genotype | WT |
Feeding | 0.0 |
Temperature | 0.0 |
Sirna | 0.0 |
Sgrna | 0.0 |
Shrna | 0.0 |
Plasmid | 0.0 |
Growth-Condition | 0.0 |
Stress | 0.0 |
Cancer | 0.0 |
Microrna | 0.0 |
Individual | 0.0 |
Antibody Used | 0.0 |
Ethnicity | 0.0 |
Dose | 0.0 |
Stimulation | 0.0 |
Host Organism | 0.0 |
Unique Molecular Identifier (Umi) | 0.0 |
Adapter Sequence | 0.0 |
Mode Of Separation | 0.0 |
Mode Of Rrna Depletion | 0.0 |
Barcode Information | 0.0 |
Nucelase Used | 0.0 |
Kit Used | 0.0 |
Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
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SRR27731319 | Homo sapiens | A549 cells | A549 | Ribo-Seq | 0.0 | ||||||||
Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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