SRR27790704 (PRJNA1071171)

Processing Status: Not Yet Started

General Details

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Sample Name GSM8047435
Organism Homo sapiens
Release Date 10/2024

Sample Links

Run Details

Spots 33486449
Total Bases 2210105634
Total Bases 2210105634

Repository Details

SRA SRR27790704
ENA SRR27790704
BioProject PRJNA1071171

Experiment Details

Title Riboseq_U2OS_G3BP1wt_DMSO_Rep2

Sample Details

Run Accession SRR27790704
Total Number Of Spots (Original File)) 33486449
Total Number Of Bases (Original File) 2210105634
Average Read Length 66
Original File Size (Mb) 742
Experiment Id SRX23454868
Library Name GSM8047435
Library Strategy OTHER
Library Selection other
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 4000
Sra Project Accession (Srp) SRP486935
Pubmed Id <NA>
Sample SRS20307895
Biosample SAMN39677032
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM8047435
Center Name UCSF
Submission SRA1794718
Month 10
Year 2024
Author Aghi
Sample Source Bone
Sample Title Riboseq_U2OS_G3BP1wt_DMSO_Rep2
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition Wild Type
Inhibitor 0.0
Timepoint NANA
Tissue Bone
Cell-Line U2OS
Cellular-Compartment DMSO
Stage 0.0
Gene 0.0
Sex 0.0
Strain 0.0
Age 0.0
Infected 0.0
Disease 0.0
Genotype G3BP1/2 KO cells stably expressing transgenic mEGFP-G3BP1
Feeding 0.0
Temperature 0.0
Sirna 0.0
Sgrna 0.0
Shrna 0.0
Plasmid 0.0
Growth-Condition 0.0
Stress 0.0
Cancer 0.0
Microrna 0.0
Individual 0.0
Antibody Used 0.0
Ethnicity 0.0
Dose 0.0
Stimulation 0.0
Host Organism 0.0
Unique Molecular Identifier (Umi) 0.0
Adapter Sequence 0.0
Mode Of Separation 0.0
Mode Of Rrna Depletion 0.0
Barcode Information 0.0
Nucelase Used 0.0
Kit Used 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR27790704 Homo sapiens Bone U2OS Ribo-Seq 0.0
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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