SRR28560291 (PRJNA1021597)
Processing Status: Not Yet Started
General Details
| Sample Name | GSM8188698 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 4/2024 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
Run Details
| Spots | 68470632 |
|---|---|
| Total Bases | 2584581149 |
| Total Bases | 2584581149 |
Repository Details
| SRA | SRR28560291 |
|---|---|
| ENA | SRR28560291 |
| BioProject | PRJNA1021597 |
Experiment Details
| Title | A549 human lung carcinoma, WT, 0.25 µg/ml poly I:C, 4.5h, 1 |
|---|
Sample Details
| Run Accession | SRR28560291 |
|---|---|
| Total Number Of Spots (Original File)) | 68470632 |
| Total Number Of Bases (Original File) | 2584581149 |
| Average Read Length | 37 |
| Original File Size (Mb) | 900 |
| Experiment Id | SRX24159672 |
| Library Name | GSM8188698 |
| Library Strategy | OTHER |
| Library Selection | other |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina NovaSeq 6000 |
| Sra Project Accession (Srp) | SRP463488 |
| Pubmed Id | 38823018 |
| Sample | SRS20940463 |
| Biosample | SAMN40753098 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM8188698 |
| Center Name | LBG, National Institutes of Diabetes and Digestive and Kidney Diseas, National Institutes of Health |
| Submission | SRA1839854 |
| Month | 4 |
| Year | 2024 |
| Author | Karasik |
| Sample Source | Lung |
| Sample Title | A549 human lung carcinoma, WT, 0.25 µg/ml poly I:C, 4.5h, 1 |
| Library-Type | 0.0 |
| Replicate-Number | 1.0 |
| Condition | Wild Type |
| Inhibitor | 0.0 |
| Timepoint | NANA |
| Tissue | Lung |
| Cell-Line | A549 |
| Cellular-Compartment | 80S ribosome protected RNA (25-34 nt) |
| Stage | 0.0 |
| Gene | 0.0 |
| Sex | 0.0 |
| Strain | 0.0 |
| Age | 0.0 |
| Infected | 0.0 |
| Disease | 0.0 |
| Genotype | WT |
| Feeding | 0.0 |
| Temperature | 0.0 |
| Sirna | 0.0 |
| Sgrna | 0.0 |
| Shrna | 0.0 |
| Plasmid | 0.0 |
| Growth-Condition | 0.0 |
| Stress | 0.0 |
| Cancer | 0.0 |
| Microrna | 0.0 |
| Individual | 0.0 |
| Antibody Used | 0.0 |
| Ethnicity | 0.0 |
| Dose | 0.0 |
| Stimulation | 0.0 |
| Host Organism | 0.0 |
| Unique Molecular Identifier (Umi) | 0.0 |
| Adapter Sequence | 0.0 |
| Mode Of Separation | 0.0 |
| Mode Of Rrna Depletion | 0.0 |
| Barcode Information | 0.0 |
| Nucelase Used | 0.0 |
| Kit Used | 0.0 |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR28560291 | Homo sapiens | Lung | A549 | 0.0 | 0.0 |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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