SRR3131004 (PRJNA310107)
Processing Status: Completed
General Details
| Sample Name | GSM2049894 |
|---|---|
| Organism | Homo sapiens |
| Release Date | 6/2016 |
Sample Links
| GWIPS-viz | Trips-Viz | Custom Track |
|---|---|---|
| Visit Trips-Viz |
Run Details
| Spots | 9550076 |
|---|---|
| Total Bases | 487053876 |
| Total Bases | 487053876 |
Repository Details
| SRA | SRR3131004 |
|---|---|
| ENA | SRR3131004 |
| BioProject | PRJNA310107 |
Experiment Details
| Title | MDA-ctrl-RPF-rep1-readlane2 |
|---|
Sample Details
| Run Accession | SRR3131004 |
|---|---|
| Total Number Of Spots (Original File)) | 9550076 |
| Total Number Of Bases (Original File) | 487053876 |
| Average Read Length | 51 |
| Original File Size (Mb) | 302 |
| Experiment Id | SRX1550665 |
| Library Strategy | RNA-Seq |
| Library Selection | cDNA |
| Library Source | TRANSCRIPTOMIC |
| Library Layout | SINGLE |
| Insert Size | 0 |
| Insert Deviation | 0 |
| Platform | ILLUMINA |
| Model | Illumina HiSeq 2000 |
| Sra Project Accession (Srp) | SRP069011 |
| Pubmed Id | 27259150 |
| Sample | SRS1267380 |
| Biosample | SAMN04446348 |
| Sample Type | simple |
| Organism Taxid | 9606 |
| Organism | Homo sapiens |
| Sample Name | GSM2049894 |
| Center Name | GEO |
| Submission | SRA342556 |
| Month | 6 |
| Year | 2016 |
| Author | Goodarzi |
| Sample Source | MDA-parental |
| Sample Title | MDA-ctrl-RPF-rep1-readlane2 |
| Library-Type | Ribo-Seq |
| Replicate-Number | 1.0 |
| Condition | Control |
| Inhibitor | Cycloheximide |
| Tissue | Breast |
| Cell-Line | MDA |
| Cellular-Compartment | RPF |
| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SRR3131004 | Homo sapiens | MDA-parental | MDA | Ribo-Seq | Cycloheximide |  |
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| Run Accession | Study Accession | Scientific Name | Description | Cell Line | Library Type | Treatment | Trips-Viz | GWIPS-viz | Reads | BAM | BigWig (F) | BigWig (R) |
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