SRR3208886 (PRJNA314507)

Processing Status: Completed

General Details

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Sample Name GSM2082538
Organism Homo sapiens
Release Date 7/2016

Sample Links

Run Details

Spots 27716403
Total Bases 1413536553
Total Bases 1413536553

Repository Details

SRA SRR3208886
ENA SRR3208886
BioProject PRJNA314507

Experiment Details

Title Ribosome protected fragments (RPF) of TSC2+/+ cells (number 15) treated with DMSO, Biological Replicate 2

Sample Details

Run Accession SRR3208886
Total Number Of Spots (Original File)) 27716403
Total Number Of Bases (Original File) 1413536553
Average Read Length 51
Original File Size (Mb) 822
Experiment Id SRX1617569
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP071235
Pubmed Id 27655340
Sample SRS1326991
Biosample SAMN04536303
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM2082538
Center Name GEO
Submission SRA379362
Month 7
Year 2016
Author Grabole
Sample Source TSC2+/+ cells (number 15) treated with DMSO, RPF
Sample Title Ribosome protected fragments (RPF) of TSC2+/+ cells (number 15) treated with DMSO, Biological Replicate 2
Library-Type Ribo-Seq
Replicate-Number 2.0
Condition High
Cellular-Compartment DMSO
Genotype TSC2+/+
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR3208886 Homo sapiens TSC2+/+ cells (number 15) treated with DMSO, RPF Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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