SRR3208889 (PRJNA314507)

Processing Status: Completed

General Details

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Sample Name GSM2082541
Organism Homo sapiens
Release Date 7/2016

Sample Links

Run Details

Spots 37247298
Total Bases 1899612198
Total Bases 1899612198

Repository Details

SRA SRR3208889
ENA SRR3208889
BioProject PRJNA314507

Experiment Details

Title Ribosome protected fragments (RPF) of TSC2+/+ cells (number 15) treated with Rapamycin, Biological Replicate 1

Sample Details

Run Accession SRR3208889
Total Number Of Spots (Original File)) 37247298
Total Number Of Bases (Original File) 1899612198
Average Read Length 51
Original File Size (Mb) 868
Experiment Id SRX1617572
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina HiSeq 2500
Sra Project Accession (Srp) SRP071235
Pubmed Id 27655340
Sample SRS1326988
Biosample SAMN04536306
Sample Type simple
Organism Taxid 9606
Organism Homo sapiens
Sample Name GSM2082541
Center Name GEO
Submission SRA379362
Month 7
Year 2016
Author Grabole
Sample Source TSC2+/+ cells (number 15) treated with Rapamycin, RPF
Sample Title Ribosome protected fragments (RPF) of TSC2+/+ cells (number 15) treated with Rapamycin, Biological Replicate 1
Library-Type Ribo-Seq
Replicate-Number 1.0
Condition High
Inhibitor rapamycin
Genotype TSC2+/+
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR3208889 Homo sapiens TSC2+/+ cells (number 15) treated with Rapamycin, RPF Ribo-Seq rapamycin
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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