SRR364363 (PRJNA148631)

Processing Status: Completed

General Details

View quality reports

Sample Name GSM832606
Organism Escherichia coli
Release Date 12/2011

Sample Links

Run Details

Spots 20151889
Total Bases 866531227
Total Bases 866531227

Repository Details

SRA SRR364363
ENA SRR364363
BioProject PRJNA148631

Experiment Details

Title DSP1_AP

Sample Details

Run Accession SRR364363
Total Number Of Spots (Original File)) 20151889
Total Number Of Bases (Original File) 866531227
Average Read Length 43
Original File Size (Mb) 396
Experiment Id SRX105574
Library Name GSM832606: DSP1_AP
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP009321
Pubmed Id 22153074
Sample SRS270338
Biosample SAMN00754037
Sample Type simple
Organism Taxid 562
Organism Escherichia coli
Sample Name GSM832606
Center Name GEO
Submission SRA048063
Month 12
Year 2011
Author Oh
Sample Source Harvested by chloramphenicol pre-treatment and centrifugation; DSP treated ex vivo; Affinity purified TF crosslinked RNC footprints
Sample Title DSP1_AP
Library-Type Ribo-Seq
Stage mid-log phase
Strain MC4100
Genotype MC4100 ∆tig::kan pTig-TEV-Avi
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR364363 Escherichia coli Harvested by chloramphenicol pre-treatment and centrifugation; DSP treated ex vivo; Affinity purified TF crosslinked RNC footprints Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About