SRR364364 (PRJNA148631)

Processing Status: Completed

General Details

View quality reports

Sample Name GSM832607
Organism Escherichia coli
Release Date 12/2011

Sample Links

Run Details

Spots 19274111
Total Bases 828786773
Total Bases 828786773

Repository Details

SRA SRR364364
ENA SRR364364
BioProject PRJNA148631

Experiment Details

Title DSP1_Total

Sample Details

Run Accession SRR364364
Total Number Of Spots (Original File)) 19274111
Total Number Of Bases (Original File) 828786773
Average Read Length 43
Original File Size (Mb) 371
Experiment Id SRX105575
Library Name GSM832607: DSP1_Total
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP009321
Pubmed Id 22153074
Sample SRS270339
Biosample SAMN00754038
Sample Type simple
Organism Taxid 562
Organism Escherichia coli
Sample Name GSM832607
Center Name GEO
Submission SRA048063
Month 12
Year 2011
Author Oh
Sample Source Harvested by chloramphenicol pre-treatment and centrifugation; DSP treated ex vivo; Total footprints
Sample Title DSP1_Total
Library-Type Ribo-Seq
Stage mid-log phase
Strain MC4100
Genotype MC4100 ∆tig::kan pTig-TEV-Avi
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR364364 Escherichia coli Harvested by chloramphenicol pre-treatment and centrifugation; DSP treated ex vivo; Total footprints Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

ⓘ For more Information on the columns shown here see: About