SRR364365 (PRJNA148631)

Processing Status: Completed

General Details

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Sample Name GSM832608
Organism Escherichia coli
Release Date 12/2011

Sample Links

Run Details

Spots 19888911
Total Bases 855223173
Total Bases 855223173

Repository Details

SRA SRR364365
ENA SRR364365
BioProject PRJNA148631

Experiment Details

Title DSP2_AP

Sample Details

Run Accession SRR364365
Total Number Of Spots (Original File)) 19888911
Total Number Of Bases (Original File) 855223173
Average Read Length 43
Original File Size (Mb) 391
Experiment Id SRX105576
Library Name GSM832608: DSP2_AP
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP009321
Pubmed Id 22153074
Sample SRS270340
Biosample SAMN00754039
Sample Type simple
Organism Taxid 562
Organism Escherichia coli
Sample Name GSM832608
Center Name GEO
Submission SRA048063
Month 12
Year 2011
Author Oh
Sample Source Harvested by chloramphenicol pre-treatment and centrifugation; DSP treated ex vivo; Affinity purified TF crosslinked RNC footprints
Sample Title DSP2_AP
Library-Type Ribo-Seq
Stage mid-log phase
Strain MC4100
Genotype MC4100 ∆tig::kan pTig-TEV-Avi
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR364365 Escherichia coli Harvested by chloramphenicol pre-treatment and centrifugation; DSP treated ex vivo; Affinity purified TF crosslinked RNC footprints Ribo-Seq
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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