SRR387871 (PRJNA149975)

Processing Status: Completed

General Details

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Sample Name GSM843747
Organism Saccharomyces cerevisiae
Release Date 1/2012

Sample Links

Run Details

Spots 21155927
Total Bases 846237080
Total Bases 846237080

Repository Details

SRA SRR387871
ENA SRR387871
BioProject PRJNA149975

Experiment Details

Title footprints for exponential vegetative cells of the strain 14201 (used for the ndt80 release timecourse)

Sample Details

Run Accession SRR387871
Total Number Of Spots (Original File)) 21155927
Total Number Of Bases (Original File) 846237080
Average Read Length 40
Original File Size (Mb) 421
Experiment Id SRX110549
Library Name GSM843747: footprints for exponential vegetative cells of the strain 14201 (used for the ndt80 release timecourse)
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP009639
Pubmed Id 22194413
Sample SRS281767
Biosample SAMN00761929
Sample Type simple
Organism Taxid 4932
Organism Saccharomyces cerevisiae
Sample Name GSM843747
Center Name GEO
Submission SRA048501
Month 1
Year 2012
Author Brar
Sample Source S. cerevisiae vegetative
Sample Title footprints for exponential vegetative cells of the strain 14201 (used for the ndt80 release timecourse)
Library-Type Ribo-Seq
Condition Test
Inhibitor Cycloheximide
Cell-Line SK1
Strain SK1
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR387871 Saccharomyces cerevisiae S. cerevisiae vegetative SK1 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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