SRR387872 (PRJNA149975)

Processing Status: Completed

General Details

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Sample Name GSM843748
Organism Saccharomyces cerevisiae
Release Date 1/2012

Sample Links

Run Details

Spots 20915375
Total Bases 836615000
Total Bases 836615000

Repository Details

SRA SRR387872
ENA SRR387872
BioProject PRJNA149975

Experiment Details

Title footprints for exponential vegetative cells of the strain gb15 (used for the traditional timecourse)

Sample Details

Run Accession SRR387872
Total Number Of Spots (Original File)) 20915375
Total Number Of Bases (Original File) 836615000
Average Read Length 40
Original File Size (Mb) 406
Experiment Id SRX110550
Library Name GSM843748: footprints for exponential vegetative cells of the strain gb15 (used for the traditional timecourse)
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP009639
Pubmed Id 22194413
Sample SRS281768
Biosample SAMN00761930
Sample Type simple
Organism Taxid 4932
Organism Saccharomyces cerevisiae
Sample Name GSM843748
Center Name GEO
Submission SRA048501
Month 1
Year 2012
Author Brar
Sample Source S. cerevisiae vegetative
Sample Title footprints for exponential vegetative cells of the strain gb15 (used for the traditional timecourse)
Library-Type Ribo-Seq
Condition Test
Inhibitor Cycloheximide
Cell-Line SK1
Strain SK1
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR387872 Saccharomyces cerevisiae S. cerevisiae vegetative SK1 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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