SRR387886 (PRJNA149975)

Processing Status: Completed

General Details

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Sample Name GSM843762
Organism Saccharomyces cerevisiae
Release Date 1/2012

Sample Links

Run Details

Spots 13362439
Total Bases 534497560
Total Bases 534497560

Repository Details

SRA SRR387886
ENA SRR387886
BioProject PRJNA149975

Experiment Details

Title footprints for the 3 timepoint of the ndt80 release timecourse

Sample Details

Run Accession SRR387886
Total Number Of Spots (Original File)) 13362439
Total Number Of Bases (Original File) 534497560
Average Read Length 40
Original File Size (Mb) 377
Experiment Id SRX110564
Library Name GSM843762: footprints for the 3 timepoint of the ndt80 release timecourse
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP009639
Pubmed Id 22194413
Sample SRS281782
Biosample SAMN00761944
Sample Type simple
Organism Taxid 4932
Organism Saccharomyces cerevisiae
Sample Name GSM843762
Center Name GEO
Submission SRA048501
Month 1
Year 2012
Author Brar
Sample Source S. cerevisiae sporulation media
Sample Title footprints for the 3 timepoint of the ndt80 release timecourse
Library-Type Ribo-Seq
Condition Test
Inhibitor Cycloheximide
Cell-Line SK1
Strain SK1
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR387886 Saccharomyces cerevisiae S. cerevisiae sporulation media SK1 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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