SRR387888 (PRJNA149975)

Processing Status: Completed

General Details

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Sample Name GSM843764
Organism Saccharomyces cerevisiae
Release Date 1/2012

Sample Links

Run Details

Spots 7045423
Total Bases 253635228
Total Bases 253635228

Repository Details

SRA SRR387888
ENA SRR387888
BioProject PRJNA149975

Experiment Details

Title footprints for the 5 timepoint of the ndt80 release timecourse

Sample Details

Run Accession SRR387888
Total Number Of Spots (Original File)) 7045423
Total Number Of Bases (Original File) 253635228
Average Read Length 36
Original File Size (Mb) 187
Experiment Id SRX110566
Library Name GSM843764: footprints for the 5 timepoint of the ndt80 release timecourse
Library Strategy RNA-Seq
Library Selection cDNA
Library Source TRANSCRIPTOMIC
Library Layout SINGLE
Insert Size 0
Insert Deviation 0
Platform ILLUMINA
Model Illumina Genome Analyzer II
Sra Project Accession (Srp) SRP009639
Pubmed Id 22194413
Sample SRS281784
Biosample SAMN00761946
Sample Type simple
Organism Taxid 4932
Organism Saccharomyces cerevisiae
Sample Name GSM843764
Center Name GEO
Submission SRA048501
Month 1
Year 2012
Author Brar
Sample Source S. cerevisiae sporulation media
Sample Title footprints for the 5 timepoint of the ndt80 release timecourse
Library-Type Ribo-Seq
Condition Test
Inhibitor Cycloheximide
Cell-Line SK1
Strain SK1
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)
SRR387888 Saccharomyces cerevisiae S. cerevisiae sporulation media SK1 Ribo-Seq Cycloheximide
Run Accession Study Accession Scientific Name Description Cell Line Library Type Treatment Trips-Viz GWIPS-viz Reads BAM BigWig (F) BigWig (R)

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